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Evolving Role of Genomic Assays in Breast Cancer

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Track 38

Arrow DR LOVE: Joe, can you discuss the ASCO Guidelines Committee’s recommendations, published in the November 2007 Journal of Clinical Oncology, about the use of tumor markers in breast cancer?

Arrow DR SPARANO: The panel found sufficient evidence to recommend multi-parameter gene expression analysis. They also found sufficient evidence to recommend measuring urokinase plasminogen activator (uPA) or plasminogen activator inhibitor 1 (PAI-1) using ELISA, which requires a minimum of 300 milligrams of fresh or frozen tissue. Low levels of uPA/PAI-1 are associated with a good prognosis with tamoxifen alone for patients with ER-positive disease (Harris 2007), although issues exist regarding the effect of core biopsies on the results.

Arrow DR LOVE: What are uPA and PAI-1?

Arrow DR SPARANO: They are an index of the fibrinolytic system and biological processes involved in metastasis. In terms of other markers, the panel found insufficient evidence for the use of IHC-based markers as they relate to measuring proliferation, including Ki-67, cyclin D, cyclin E, p27, p21, thymidine kinase and topoisomerase II (Harris 2007).

They also found insufficient evidence for the use of other markers that have been recently published, including cyclin E fragments, proteomic analysis and circulating tumor cells.

Regarding multiparameter gene-expression analysis, the ASCO panel concluded that the Oncotype DX assay can be used to predict the risk of recurrence in newly diagnosed patients with node-negative, ER-positive breast cancer who are treated with tamoxifen. In addition, it may be used to identify patients who are predicted to attain the most therapeutic benefit from adjuvant tamoxifen and may not require chemotherapy. Conversely, they concluded that patients with tumors with a high Recurrence Score achieve more benefit from adjuvant chemotherapy, specifically CMF, than from tamoxifen alone (Harris 2007; [3.1]).

The MammaPrint® assay appears to identify groups of patients with a particularly good or particularly poor prognosis. However, considering the design of studies used to validate the assay, it is uncertain whether the data pertain to an inherently favorable outcome in untreated patients, to patients whose prognosis is favorable due to therapy or to those with poor outcomes in the absence of treatment or despite treatment.

In addition, the need for fresh or frozen tissue makes this assay challenging in current clinical practice. The panel concluded that more definitive recommendations for the use of the MammaPrint assay in clinical practice will require data from more clearly directed studies (Harris 2007).

3.1

Track 40

Arrow DR LOVE: Do we have any data correlating the MammaPrint assay with benefit from chemotherapy?

Arrow DR SPARANO: I believe that’s one of the critical and key differences between how the MammaPrint and the Oncotype DX assays were developed and validated. They may be equally fine in terms of predicting outcomes, but they were developed in different ways.

The Oncotype DX assay was developed using data from prospective randomized trials comparing tamoxifen to placebo (Paik 2004) or tamoxifen to tamoxifen with CMF (Paik 2006), which is different from how the groups of patients were studied with the MammaPrint assay (van ‘t Veer 2002; van de Vijver 2002).

A second key difference is how the tissue is processed. For the MammaPrint assay, or any assay that requires collection of fresh tissue, you have to know in advance that the patient is a potential candidate for the test. A third important issue is the transparency of Oncotype DX as opposed to MammaPrint. MammaPrint involves a Pandora’s box of 70 genes that we know nothing about. In contrast, Oncotype DX involves a much more manageable number of genes that are familiar to us as clinicians — they make sense.

Track 41

Arrow DR LOVE: Joe, can you discuss the potential role of Oncotype DX for patients with node-positive disease?

Arrow DR SPARANO: At the 2004 San Antonio Breast Cancer Symposium, Kathy Albain presented the results from SWOG-8814, evaluating five years of tamoxifen alone or in combination with CAF for postmenopausal patients with node-positive, ER-positive disease. A better outcome was demonstrated for those who received CAF followed by sequential tamoxifen compared to those who received tamoxifen alone (Albain 2004; [3.2]).

3.2

More recently, she evaluated whether the Oncotype DX assay provided information additional to the clinical features in a subset of about 40 percent of the patients in the parent trial (Albain 2007).

In SWOG-8814, patients with a Recurrence Score of 31 or higher obtained a significant reduction in the risk of recurrence with the addition of chemotherapy. Those who had a low Recurrence Score obtained no benefit.

Among those with intermediate Recurrence Scores, a trend appeared toward benefit from the addition of chemotherapy, but the p-value was not statistically significant (Albain 2007; [3.3]). Examining these data with Forest plots reveals a strong trend favoring the administration of chemotherapy to patients who have an intermediate Recurrence Score (Albain 2007).

3.3

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Challenges in HER2 Testing and Interpretation
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Assessment of Estrogen Receptor Status
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Evolving Role of Genomic Assays in Breast Cancer
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Tissue Biomarkers in the Management of Breast Cancer:
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